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1

Dispersion state of phospholipids and fluorescence production with peroxidation in organic solvents: investigated by time-resolved fluorescence technique

Jin-Ye Wang, Ken-ichiro Suzuki, Tetsuro Fujisawa, Tatzuo Ueki, Tsutomu Kouyama

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

1995

Language:

english

File:

PDF, 784 KB

english, 1995

2

Crystal Structure of the M Intermediate of Bacteriorhodopsin: Allosteric Structural Changes Mediated by Sliding Movement of a Transmembrane Helix

Kazuki Takeda, Yasuhiro Matsui, Nobuo Kamiya, Shin-ichi Adachi, Hideo Okumura, Tsutomu Kouyama

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 1.19 MB

english, 2004

3

Corrigendum to “Crystal Structures of Different Substates of Bacteriorhodopsin’s M Intermediate at Various pH Levels” [J. Mol. Biol. (2009) 393, 559–573]

Masataka Yamamoto, Naoki Hayakawa, Midori Murakami, Tsutomu Kouyama

Journal:

Journal of Molecular Biology

Year:

2009

Language:

english

File:

PDF, 81 KB

english, 2009

4

2P037 A novel lid structure found in Natronomonas pharaonis halorhodopsin(The 48th Annual Meeting of the Biophysical Society of Japan)

Ihara, Kunio, Kanada, Soun, Kitajima-Ihara, Tomomi, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2010

Language:

english

File:

PDF, 236 KB

english, 2010

5

3P-216 Crystallization or octopus rhodopsin(Photobiology:Vision & Photoreception,The 47th Annual Meeting of the Biophysical Society of Japan)

Zhang, Jin, Kanada, Soun, Tsuda, Motoyuki, Iwasa, Tatsuo, Murakami, Midori, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2009

Language:

english

File:

PDF, 233 KB

english, 2009

6

1Q1536 P66 X-ray crystallographic studies of squid lumirhodopsin(Photobiology: Vision & Photoreception 1,The 49th Annual Meeting of the Biophysical Society of Japan)

Murakami, Midori, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2011

Language:

english

File:

PDF, 230 KB

english, 2011

7

2P152 Crystallization and X-ray crystallographic study of squid rhodopsin(34. Membrane protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Murakami, Midori, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2006

Language:

english

File:

PDF, 163 KB

english, 2006

8

Structural Role of Bacterioruberin in the Trimeric Structure of Archaerhodopsin-2

Keiko Yoshimura, Tsutomu Kouyama

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 4.19 MB

english, 2008

9

Effect of Xenon Binding to a Hydrophobic Cavity on the Proton Pumping Cycle in Bacteriorhodopsin

Naoki Hayakawa, Takashi Kasahara, Daisuke Hasegawa, Keiko Yoshimura, Midori Murakami, Tsutomu Kouyama

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 1.80 MB

english, 2008

10

Structure of archaerhodopsin-2 at 1.8 Å resolution

Kouyama, Tsutomu, Fujii, Ryudo, Kanada, Soun, Nakanishi, Taichi, Chan, Siu Kit, Murakami, Midori

Journal:

Acta Crystallographica Section D Biological Crystallography

Year:

2014

Language:

english

File:

PDF, 2.45 MB

english, 2014

11

3P-217 Crystallographic studies of the light-driven chloride pump halorhodopsin from Natronomonas pharaonis(Photobiology:Vision & Photoreception,The 47th Annual Meeting of the Biophysical Society of Japan)

Kanada, Soun, Takeguchi, Yu, Murakami, Midori, Ihara, Kunio, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2009

Language:

english

File:

PDF, 233 KB

english, 2009

12

Direct observations of freeze-etching processes of ice-embedded biomembranes by atomic force microscopy

Daisuke Yamamoto, Koji Tani, Toshiaki Gotoh, Tsutomu Kouyama

Journal:

Year:

2003

Language:

english

File:

PDF, 605 KB

english, 2003

13

Large Deformation of Helix F during the Photoreaction Cycle of Pharaonis Halorhodopsin in Complex with Azide

Nakanishi, Taichi, Kanada, Soun, Murakami, Midori, Ihara, Kunio, Kouyama, Tsutomu

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 2.21 MB

english, 2013

14

Crystal Structures of the L1, L2, N, and O States of pharaonis Halorhodopsin

Kouyama, Tsutomu, Kawaguchi, Haruki, Nakanishi, Taichi, Kubo, Hiroki, Murakami, Midori

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 3.08 MB

english, 2015

15

3P253 New crystal forms of squid rhodopsin(Photobiology: Vision & Photoreception,Poster,The 52th Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Midori, Murakami, Tsutomu, Kouyama

Journal:

Seibutsu Butsuri

Year:

2014

Language:

english

File:

PDF, 694 KB

english, 2014

16

Pulse-Fluorometry Study on Actin and Heavy Meromyosin Using F-Actin Labelled with N-(1-Pyrene)maleimide

Tsutomu KOUYAMA, Koshin MIHASHI

Journal:

Year:

1980

Language:

english

File:

PDF, 691 KB

english, 1980

17

2S5-2 X-ray crystallographic study of squid rhodopsin(2S5 Physical studies on the biological functions of G-protein coupled receptors,The 46th Annual Meeting of the Biophysical Society of Japan)

MURAKAMI, Midori, KOUYAMA, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2008

Language:

english

File:

PDF, 288 KB

english, 2008

18

3P246 X-ray crystallographic study on the functional role of Leu93 in bacteriorhodopsin(Biol & Artifi memb.: Transport,The 48th Annual Meeting of the Biophysical Society of Japan)

Zhang, Jin, Yamazaki, Yoshikazu, Hikake, Masanori, Murakami, Midori, Ihara, Kunio, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2010

Language:

english

File:

PDF, 232 KB

english, 2010

19

3S2-5 Structural comparison of archaeal and invertebrate rhodopsins(3S2 Structural basis for membrane-mediated transport and signal conversion,The 46th Annual Meeting of the Biophysical Society of Japan)

Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2008

Language:

english

File:

PDF, 535 KB

english, 2008

20

Pulse fluorimetric study of labelled actin—DNase I complex

Takamitsu Ikkai, Koshin Mihashi, Tsutomu Kouyama

Journal:

Year:

1980

Language:

english

File:

PDF, 264 KB

english, 1980

21

Specific Damage Induced by X-ray Radiation and Structural Changes in the Primary Photoreaction of Bacteriorhodopsin

Yasuhiro Matsui, Keisuke Sakai, Midori Murakami, Yoshitsugu Shiro, Shin-ichi Adachi, Hideo Okumura, Tsutomu Kouyama

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 1.19 MB

english, 2002

22

3P240 Photoreaction cycle of a bacteriorhodopsin-halorhodopsin chimeric protein(Photobiology: Vision & Photoreception,Poster,The 52th Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Shinji, Uyama, Tomomi, Kitajima, Midori, Murakami, Tsutomu, Kouyama

Journal:

Seibutsu Butsuri

Year:

2014

Language:

english

File:

PDF, 730 KB

english, 2014

23

Immobility of the chromophore in bacteriorhodopsin

Tsutomu Kouyama, Yoshiaki Kimura, Kazuhiko Kinosita jr, Akira Ikegami

Journal:

Year:

1981

Language:

english

File:

PDF, 387 KB

english, 1981

24

Polyhedral assembly of a membrane protein in its three-dimensional crystal

Tsutomu Kouyama, Masaki Yamamoto, Nobuo Kamiya, Hitoshi Iwasaki, Tatzuo Ueki, Ikuko Sakurai

Journal:

Journal of Molecular Biology

Year:

1994

Language:

english

File:

PDF, 578 KB

english, 1994

25

Crystal Structures of Archaerhodopsin-1 and -2: Common Structural Motif in Archaeal Light-driven Proton Pumps

Nobuo Enami, Keiko Yoshimura, Midori Murakami, Hideo Okumura, Kunio Ihara, Tsutomu Kouyama

Journal:

Journal of Molecular Biology

Year:

2006

Language:

english

File:

PDF, 1.16 MB

english, 2006

26

Crystallographic Analysis of the Primary Photochemical Reaction of Squid Rhodopsin

Midori Murakami, Tsutomu Kouyama

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 1.50 MB

english, 2011

27

Transmembrane Location of Retinal in Purple Membrane

Kometani, Tadaatsu, Kinosita, Kazuhiko, Furuno, Taiji, Kouyama, Tsutomu, Ikegami, Akira

Journal:

Biophysical Journal

Year:

1987

Language:

english

File:

PDF, 1.15 MB

english, 1987

28

Bacteriorhodopsin photoreaction: identification of a long-lived intermediate N (P, R350) at high pH and its M-like photoproduct

Kouyama, Tsutomu, Nasuda-Kouyama, Akemi, Ikegami, Akira, Mathew, Mathew K., Stoeckenius, Walther

Journal:

Year:

1988

Language:

english

File:

PDF, 1.12 MB

english, 1988

29

A Light-Responsive Self-Assembly Formed by a Cationic Azobenzene Derivative and SDS as a Drug Delivery System

Geng, Shengyong, Wang, Yuzhu, Wang, Liping, Kouyama, Tsutomu, Gotoh, Toshiaki, Wada, Satoshi, Wang, Jin-Ye

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 2.21 MB

english, 2017

30

2P-240 Light-induced structural changes of bacteriorhodopsin at alkaline pH(The 46th Annual Meeting of the Biophysical Society of Japan)

Yamamoto, Masataka, Murakami, Midori, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2008

Language:

english

File:

PDF, 289 KB

english, 2008

31

2TA2-07 X-ray crystallographic study of the batho intermediate of squid rhodopsin(The 47th Annual Meeting of the Biophysical Society of Japan)

Murakami, Midori, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2009

Language:

english

File:

PDF, 240 KB

english, 2009

32

Electron Cryomicroscopy of Bacteriorhodopsin Vesicles: Mechanism of Vesicle Formation

Denkov, Nikolai D., Yoshimura, Hideyuki, Kouyama, Tsutomu, Walz, Jochen, Nagayama, Kuniaki

Journal:

Biophysical Journal

Year:

1998

Language:

english

File:

PDF, 534 KB

english, 1998

33

Nanoparticle Arrays in Freely Suspended Vitrified Films

Denkov, Nikolai D., Yoshimura, Hideyuki, Nagayama, Kuniaki, Kouyama, Tsutomu

Journal:

Physical Review Letters

Year:

1996

Language:

english

File:

PDF, 155 KB

english, 1996

34

3P102 Fabrication of freeze fracture cryogenic atomic force microscope(03. Membrane proteins,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Kuga, Naoto, Gotoh, Toshiaki, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2014

Language:

english

File:

PDF, 1.00 MB

english, 2014

35

Fluorimetry Study of N-(1-Pyrenyl)iodoacetamide-Labelled F-Actin : Local Structural Change of Actin Protomer both on Polymerization and on Binding of Heavy Meromyosin

Tsutomu KOUYAMA, Koshin MIHASHI

Journal:

Year:

1981

Language:

english

File:

PDF, 575 KB

english, 1981

36

Fluorescence energy transfer studies of transmembrane location` of retinal in purple membrane

Tsutomu Kouyama, Kazuhiko Kinosita Jr, Akira Ikegami

Journal:

Journal of Molecular Biology

Year:

1983

Language:

english

File:

PDF, 894 KB

english, 1983

37

3P-219 Crystallization of halorhodopsin from the haloalkaliphilic archaeon Natronomonas pharaonis(The 46th Annual Meeting of the Biophysical Society of Japan)

Takeguchi, Yu, Narusawa, Hiroaki, Ihara, Kunio, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2008

Language:

english

File:

PDF, 286 KB

english, 2008

38

1P232 Crystallographic analysis of the N intermediate of pharaonis halorhodopsin(18A. Photobiology: Vision & Photoreception,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Kawaguchi, Haruki, Nakanishi, Taichi, Murakami, Midori, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2014

Language:

english

File:

PDF, 730 KB

english, 2014

39

1P093 Crystal Structures of M Intermediate of Archaerhodopsin-2(Membrane proteins,Poster Presentations)

Fujii, Ryudo, Yoshimura, Keiko, Murakami, Midori, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2007

Language:

english

File:

PDF, 231 KB

english, 2007

40

1P256 X-ray crystallographic studies of the primary photoproducts of squid rhodopsin(Photobiology:Vision & Photoreception,The 48th Annual Meeting of the Biophysical Society of Japan)

Murakami, Midori, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2010

Language:

english

File:

PDF, 233 KB

english, 2010

41

FORMATION AND DECAY KINETICS OF BACTERIORHODOPSIN'S N INTERMEDIATE: SOFTENING THE PROTEIN CONFORMATION WITH ALCOHOLS AFFECTS INTRA-PIROTEIN PROTON TRANSFER AND RETINAL ISIOMERIZATION

Kazuya Fukuda, Tsutomu Kouyama

Journal:

Photochemistry and Photobiology

Year:

1992

Language:

english

File:

PDF, 559 KB

english, 1992

42

A novel three-dimensional crystal of bacteriorhodopsin obtained by successive fusion of the vesicular assemblies

Kazuki Takeda, Hidenori Sato, Tomoya Hino, Masahiro Kono, Kazuya Fukuda, Ikuko Sakurai, Tetsuji Okada, Tsutomu Kouyama

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 559 KB

english, 1998

43

Molecular structural studies of effector functions of a mouse immunoglobulin G that lacks the entire CH1 domain: Small-angle X-ray scattering, nanosecond fluorescence depolarization and stable isotope-aided NMR analyses

Mizutani Ryuta, Matsunaga Chigusa, Kouyama Tsutomu, Sato Mamoru, Katsube Yukiteru, Kato Koichi, Shimada Ichio, Arata Yoji

Journal:

Molecular Immunology

Year:

1993

Language:

english

File:

PDF, 623 KB

english, 1993

44

Molecular Organization and Dynamics in Bacteriorhodopsin-Rich Reconstituted Membranes: Discrimination of Lipid Environments by the Oxygen Transport Parameter Using a Pulse ESR Spin-Labeling Technique

Ashikawa, Ikuo, Yin, Jun-Jie, Subczynski, Witold K., Kouyama, Tsutomu, Hyde, James S., Kusumi, Akihiro

Journal:

Year:

1994

Language:

english

File:

PDF, 792 KB

english, 1994

45

1P233 Photostability of the trimeric form of cruxrhodopsin(18A. Photobiology: Vision & Photoreception,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Chan, Siu Kit, Kitajima, Tomomi, Murakami, Midori, Ihara, Kunio, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2014

Language:

english

File:

PDF, 730 KB

english, 2014

46

1P096 Decay kinetics of the M intermediate of bR in 3D crystals : Influence of the crystal lattice force(Membrane proteins,Oral Presentations)

Yamamoto, Masataka, Hayakawa, Naoki, Murakami, Midori, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2007

Language:

english

File:

PDF, 227 KB

english, 2007

47

2Q1424 Crystal structure of the O intermediate of bacteriorhodopsin(Photobiology: Vision & Photoreception 2,The 48th Annual Meeting of the Biophysical Society of Japan)

Zhang, Jin, Yamazaki, Yosikazu, Hikake, Masanori, Murakami, Midori, Ihara, Kunio, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2011

Language:

english

File:

PDF, 252 KB

english, 2011

48

3P245 X-ray Crystallographic studies of the Light-Driven Chloride Pump Halorhodopsin from Natronomonas pharaonis(Biol & Artifi memb.: Transport,The 48th Annual Meeting of the Biophysical Society of Japan)

Kouyama, Tsutomu, Kanada, Soun, Zhang, Jin, Takeguchi, Yu, Murakami, Midori, Ihara, Kunio

Journal:

Seibutsu Butsuri

Year:

2010

Language:

english

File:

PDF, 232 KB

english, 2010

49

1P092 Halorhodopsin from an extremely haloalkaliphilic archaeon Natronomonas pharaonis(Membrane proteins,Poster Presentations)

Narusawa, Akihiro, Maruyama, Keita, Takeguchi, Yuu, Ihara, Kunio, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2007

Language:

english

File:

PDF, 231 KB

english, 2007

50

Crystal Structures of Two Isozymes of Citrate Synthase from Sulfolobus tokodaii Strain 7

Murakami, Midori, Kouyama, Tsutomu

Journal:

Biochemistry Research International

Year:

2016

Language:

english

File:

PDF, 9.51 MB

english, 2016

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